Detailed information of evm.model.Chr09.1244 in Hemicorallium imperiale

Genomic Location: Chr09:21416601...21422014
NR annotation: KAG1650977.1, Zinc finger SWIM domain-containing protein 3 [Nymphon striatum]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr09.1244 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000545 (this species only)
Ubiquitin familyE3|E3 activity RING|PHD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00628
all species →		PHDPHD-fingerDomainInterproscan
PF04434
all species →		SWIMSWIM zinc fingerDomainInterproscan
PF21056
all species →		ZSWIM1-3_RNaseH-likeZinc finger SWIM domain-containing protein 1/3, RNaseH-like domainDomainInterproscan
PF21599
all species →		ZSWIM3_NZinc finger SWIM domain-containing protein 3, N-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007527
all species →		DomainZinc finger, SWIM-typeInterproscan
IPR011011
all species →		Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR001965
all species →		DomainZinc finger, PHD-typeInterproscan
IPR019787
all species →		DomainZinc finger, PHD-fingerInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR048324
all species →		DomainZSWIM1/3, RNaseH-like domainInterproscan
IPR048325
all species →		DomainZSWIM3, N-terminal domainInterproscan
IPR052579
all species →		FamilyZinc finger SWIM domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31569
all species →		SWIM-TYPE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr09.1244.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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