Detailed information of evm.model.Chr09.1254 in Hemicorallium imperiale

Genomic Location: Chr09:21578368...21611691
NR annotation: XP_028395906.1, protein jagged-1a-like isoform X1 [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr09.1254 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P78504Protein jagged-1 OS=Homo sapiens OX=9606 GN=JAG1 PE=1 SV=3
Q90Y57Protein jagged-1a OS=Danio rerio OX=7955 GN=jag1a PE=2 SV=1
Q90Y54Protein jagged-1b OS=Danio rerio OX=7955 GN=jag1b PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000327 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07657
all species →
MNNLN terminus of Notch ligand C2-like domainDomainInterproscan
PF12661
all species →
hEGFHuman growth factor-like EGFDomainInterproscan
PF01414
all species →
DSLDelta serrate ligandDomainInterproscan
PF21700
all species →
DL-JAG_EGF-likeDelta-like/Jagged, EGF-like domainDomainInterproscan
PF00008
all species →
EGFEGF-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742
all species →
DomainEGF-like domainInterproscan
IPR000152
all species →
PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR011651
all species →
DomainNotch ligand, N-terminal domainInterproscan
IPR003645
all species →
DomainFollistatin-like, N-terminalInterproscan
IPR050906
all species →
FamilyNotch signaling pathwayInterproscan
IPR018097
all species →
Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR001881
all species →
DomainEGF-like calcium-binding domainInterproscan
IPR013032
all species →
Conserved_siteEGF-like, conserved siteInterproscan
IPR001007
all species →
DomainVWFC domainInterproscan
IPR001774
all species →
DomainDelta/Serrate/lag-2 (DSL) proteinInterproscan
IPR009030
all species →
Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24044
all species →
NOTCH LIGAND FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007219
all species →
Biological ProcessNotch signaling pathwayInterproscan
GO:0007275
all species →
Biological Processmulticellular organism developmentInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0005112
all species →
Molecular FunctionNotch bindingInterproscan
GO:0005509
all species →
Molecular Functioncalcium ion bindingInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0007154
all species →
Biological Processcell communicationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr09.1254.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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