Detailed information of evm.model.Chr09.1280 in Hemicorallium imperiale

Genomic Location: Chr09:21883214...21884146
NR annotation: CAB4009836.1, Cyclin-H [Paramuricea clavata]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr09.1280 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q61458Cyclin-H OS=Mus musculus OX=10090 GN=Ccnh PE=1 SV=2
Q3ZBL9Cyclin-H OS=Bos taurus OX=9913 GN=CCNH PE=2 SV=1
P51946Cyclin-H OS=Homo sapiens OX=9606 GN=CCNH PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009312 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00134
all species →		Cyclin_NCyclin, N-terminal domainDomainInterproscan
PF16899
all species →		Cyclin_C_2Cyclin C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006671
all species →		DomainCyclin, N-terminalInterproscan
IPR036915
all species →		Homologous_superfamilyCyclin-like superfamilyInterproscan
IPR031658
all species →		DomainCyclin, C-terminal domain 2Interproscan
IPR043198
all species →		FamilyCyclin/Cyclin-like subunit Ssn8Interproscan
IPR013763
all species →		DomainCyclin-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10026
all species →		CYCLINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000079
all species →		Biological Processregulation of cyclin-dependent protein serine/threonine kinase activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016538
all species →		Molecular Functioncyclin-dependent protein serine/threonine kinase regulator activityInterproscan
GO:0070816
all species →		Biological Processobsolete phosphorylation of RNA polymerase II C-terminal domainInterproscan
GO:0070985
all species →		Cellular Componenttranscription factor TFIIK complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K06634CCNH; cyclin H-DNA repair and recombination proteinsko03400deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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