Detailed information of evm.model.Chr09.1307 in Hemicorallium imperiale

Genomic Location: Chr09:22071493...22094711
NR annotation: XP_046846362.1, collagen triple helix repeat-containing protein 1-like [Xenia sp. Carnegie-2017]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96CG8Collagen triple helix repeat-containing protein 1 OS=Homo sapiens OX=9606 GN=CTHRC1 PE=1 SV=1
Q9D1D6Collagen triple helix repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Cthrc1 PE=2 SV=2
Q8CG08Collagen triple helix repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Cthrc1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07047OPA3Optic atrophy 3 protein (OPA3)FamilyInterproscan
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010754FamilyOptic atrophy 3-likeInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12499OPTIC ATROPHY 3 PROTEIN OPA3Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0019216Biological Processregulation of lipid metabolic processInterproscan

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