Detailed information of evm.model.Chr09.1341 in Hemicorallium imperiale

Genomic Location: Chr09:22530007...22534005
NR annotation: XP_028409591.1, pinin-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr09.1341 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O35691Pinin OS=Mus musculus OX=10090 GN=Pnn PE=1 SV=4
Q9H307Pinin OS=Homo sapiens OX=9606 GN=PNN PE=1 SV=5
Q5R5X0Pinin OS=Pongo abelii OX=9601 GN=PNN PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006944 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04697
all species →		Pinin_SDK_Npinin/SDK conserved regionFamilyInterproscan
PF04696
all species →		Pinin_SDK_memApinin/SDK/memA/ protein conserved regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006787
all species →		DomainPinin/SDKInterproscan
IPR039853
all species →		FamilyPininInterproscan
IPR006786
all species →		DomainPinin/SDK/MemA proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12707
all species →		PINNInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0071013
all species →		Cellular Componentcatalytic step 2 spliceosomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K13114PNN; pinin-Spliceosomeko03041deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP