Detailed information of evm.model.Chr09.1347 in Hemicorallium imperiale

Genomic Location: Chr09:22551283...22576819
NR annotation: XP_028398547.1, serum response factor-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr09.1347 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P23790Serum response factor OS=Xenopus laevis OX=8355 GN=srf PE=2 SV=1
Q9JM73Serum response factor OS=Mus musculus OX=10090 GN=Srf PE=1 SV=1
P11831Serum response factor OS=Homo sapiens OX=9606 GN=SRF PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008301 (this species only)
Transcription factor familySRF · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00319
all species →
SRF-TFSRF-type transcription factor (DNA-binding and dimerisation domain)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036879
all species →
Homologous_superfamilyTranscription factor, MADS-box superfamilyInterproscan
IPR002100
all species →
DomainTranscription factor, MADS-boxInterproscan
IPR033897
all species →
DomainMADS SRF-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37411
all species →
-Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0046983
all species →
Molecular Functionprotein dimerization activityInterproscan
GO:0000981
all species →
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0000987
all species →
Molecular Functioncis-regulatory region sequence-specific DNA bindingInterproscan
GO:0045944
all species →
Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr09.1347.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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