Gene detail

Detailed information of evm.model.Chr09.1353 in Hemicorallium imperiale

Genomic Location: Chr09:22621869...22638258
NR annotation: CAB3983775.1, Smaug homolog 1-like isoform X2 [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q80XS6	Protein Smaug homolog 2 OS=Mus musculus OX=10090 GN=Samd4b PE=1 SV=1
Q5PRF9	Protein Smaug homolog 2 OS=Homo sapiens OX=9606 GN=SAMD4B PE=1 SV=1
Q8CBY1	Protein Smaug homolog 1 OS=Mus musculus OX=10090 GN=Samd4a PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR013761	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan
IPR037093	Homologous_superfamily	Smaug, PHAT domain superfamily	Interproscan
IPR050897	Family	SMAUG/VTS1 RNA-binding	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12515	STERILE ALPHA MOTIF DOMAIN CONTAINING PROTEIN 4-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0017148	Biological Process	negative regulation of translation	Interproscan
GO:0030371	Molecular Function	translation repressor activity	Interproscan
GO:0000289	Biological Process	nuclear-transcribed mRNA poly(A) tail shortening	Interproscan
GO:0000932	Cellular Component	P-body	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K27396	SMG; protein Smaug	-	Messenger RNA biogenesis	ko03019	deepkoala