Genomic Location: Chr09:22958553...22959919
NR annotation: XP_028398512.1, high mobility group B protein 6-like [Dendronephthya gigantea]
Species abbreviation HIMPE · all data for this species · gene families
evm.model.Chr09.1383 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q4H2R2 | FACT complex subunit SSRP1 OS=Ciona intestinalis OX=7719 GN=SSRP1 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005750 (this species only) |
| Transcription factor family | HMG · all TF in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF09011 all species → | HMG_box_2 | HMG-box domain | Domain | Interproscan |
| PF00505 all species → | HMG_box | HMG (high mobility group) box | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR009071 all species → | Domain | High mobility group box domain | Interproscan |
| IPR050342 all species → | Family | High Mobility Group Box (HMGB) | Interproscan |
| IPR036910 all species → | Homologous_superfamily | High mobility group box domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR48112 all species → | HIGH MOBILITY GROUP PROTEIN DSP1 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000976 all species → | Molecular Function | transcription cis-regulatory region binding | Interproscan |
| GO:0006357 all species → | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:0008301 all species → | Molecular Function | DNA binding, bending | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K11830 | TFAM, MTTFA; transcription factor A, mitochondrial | - | Mitochondrial biogenesis | ko03029 | deepkoala |
