Gene detail

Detailed information of evm.model.Chr09.1383 in Hemicorallium imperiale

Genomic Location: Chr09:22958553...22959919
NR annotation: XP_028398512.1, high mobility group B protein 6-like [Dendronephthya gigantea]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q4H2R2	FACT complex subunit SSRP1 OS=Ciona intestinalis OX=7719 GN=SSRP1 PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	HMG

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09011	HMG_box_2	HMG-box domain	Domain	Interproscan
PF00505	HMG_box	HMG (high mobility group) box	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009071	Domain	High mobility group box domain	Interproscan
IPR050342	Family	High Mobility Group Box (HMGB)	Interproscan
IPR036910	Homologous_superfamily	High mobility group box domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48112	HIGH MOBILITY GROUP PROTEIN DSP1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000976	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0008301	Molecular Function	DNA binding, bending	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11830	TFAM, MTTFA; transcription factor A, mitochondrial	-	Mitochondrial biogenesis	ko03029	deepkoala