Genomic Location: Chr09:22995838...23025180
NR annotation: XP_028396006.1, AT-rich interactive domain-containing protein 4B-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families
evm.model.Chr09.1388 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| A2CG63 | AT-rich interactive domain-containing protein 4B OS=Mus musculus OX=10090 GN=Arid4b PE=1 SV=1 |
| Q4LE39 | AT-rich interactive domain-containing protein 4B OS=Homo sapiens OX=9606 GN=ARID4B PE=1 SV=2 |
| Q9JKB5 | AT-rich interactive domain-containing protein 4B OS=Rattus norvegicus OX=10116 GN=Arid4b PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0006047 (this species only) |
| Transcription factor family | ARID · all TF in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00076 all species → | RRM_1 | RNA recognition motif | Domain | Interproscan |
| PF11717 all species → | Tudor-knot | RNA binding activity-knot of a chromodomain | Family | Interproscan |
| PF00168 all species → | C2 | C2 domain | Domain | Interproscan |
| PF01388 all species → | ARID | ARID/BRIGHT DNA binding domain | Domain | Interproscan |
| PF08169 all species → | RBB1NT | RBB1NT (NUC162) domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001606 all species → | Domain | ARID DNA-binding domain | Interproscan |
| IPR016197 all species → | Homologous_superfamily | Chromo-like domain superfamily | Interproscan |
| IPR000504 all species → | Domain | RNA recognition motif domain | Interproscan |
| IPR002999 all species → | Domain | Tudor domain | Interproscan |
| IPR012677 all species → | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR036431 all species → | Homologous_superfamily | ARID DNA-binding domain superfamily | Interproscan |
| IPR035892 all species → | Homologous_superfamily | C2 domain superfamily | Interproscan |
| IPR025995 all species → | Domain | RNA binding activity-knot of a chromodomain | Interproscan |
| IPR035979 all species → | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR000008 all species → | Domain | C2 domain | Interproscan |
| IPR051232 all species → | Family | AT-rich Interactive Domain/SWI1 Chromatin Remodeling | Interproscan |
| IPR034221 all species → | Domain | RBM34, RNA recognition motif 2 | Interproscan |
| IPR012603 all species → | Domain | ARID4A/B, PWWP domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13964 all species → | RBP-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
| GO:0003723 all species → | Molecular Function | RNA binding | Interproscan |
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0000976 all species → | Molecular Function | transcription cis-regulatory region binding | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0006357 all species → | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
evm.model.Chr09.1388.
