Detailed information of evm.model.Chr09.1388 in Hemicorallium imperiale

Genomic Location: Chr09:22995838...23025180
NR annotation: XP_028396006.1, AT-rich interactive domain-containing protein 4B-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
A2CG63AT-rich interactive domain-containing protein 4B OS=Mus musculus OX=10090 GN=Arid4b PE=1 SV=1
Q4LE39AT-rich interactive domain-containing protein 4B OS=Homo sapiens OX=9606 GN=ARID4B PE=1 SV=2
Q9JKB5AT-rich interactive domain-containing protein 4B OS=Rattus norvegicus OX=10116 GN=Arid4b PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyARID

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan
PF11717Tudor-knotRNA binding activity-knot of a chromodomain FamilyInterproscan
PF00168C2C2 domainDomainInterproscan
PF01388ARIDARID/BRIGHT DNA binding domainDomainInterproscan
PF08169RBB1NTRBB1NT (NUC162) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001606DomainARID DNA-binding domainInterproscan
IPR016197Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR002999DomainTudor domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR036431Homologous_superfamilyARID DNA-binding domain superfamilyInterproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR025995DomainRNA binding activity-knot of a chromodomainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR000008DomainC2 domainInterproscan
IPR051232FamilyAT-rich Interactive Domain/SWI1 Chromatin RemodelingInterproscan
IPR034221DomainRBM34, RNA recognition motif 2Interproscan
IPR012603DomainARID4A/B, PWWP domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13964RBP-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

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