Detailed information of evm.model.Chr09.1393 in Hemicorallium imperiale

Genomic Location: Chr09:23064468...23064815
NR annotation: CAB4038082.1, 39S ribosomal L30, mitochondrial [Paramuricea clavata]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr09.1393 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9D7N6Large ribosomal subunit protein uL30m OS=Mus musculus OX=10090 GN=Mrpl30 PE=1 SV=1
P0C2C1Large ribosomal subunit protein uL30m OS=Rattus norvegicus OX=10116 GN=Mrpl30 PE=1 SV=1
B9E9K9Large ribosomal subunit protein uL30 OS=Macrococcus caseolyticus (strain JCSC5402) OX=458233 GN=rpmD PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010611 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00327
all species →		Ribosomal_L30Ribosomal protein L30p/L7eDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036919
all species →		Homologous_superfamilyLarge ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyInterproscan
IPR005996
all species →		FamilyLarge ribosomal subunit protein uL30, bacterial-typeInterproscan
IPR016082
all species →		DomainLarge ribosomal subunit protein uL30-like, ferredoxin-like fold domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15892
all species →		MITOCHONDRIAL RIBOSOMAL PROTEIN L30Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0006412
all species →		Biological ProcesstranslationInterproscan
GO:0015934
all species →		Cellular Componentlarge ribosomal subunitInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02907RP-L30, MRPL30, rpmD; large subunit ribosomal protein L30-Ribosomeko03011deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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