Gene detail

Detailed information of evm.model.Chr09.1424 in Hemicorallium imperiale

Genomic Location: Chr09:23474756...23481476
NR annotation: CAB3982393.1, N-acetylglucosamine-1-phosphotransferase subunits alpha beta [Paramuricea clavata]
Species abbreviation HIMPE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Chr09.1424 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q69ZN6	N-acetylglucosamine-1-phosphotransferase subunits alpha/beta OS=Mus musculus OX=10090 GN=Gnptab PE=2 SV=2
Q3T906	N-acetylglucosamine-1-phosphotransferase subunits alpha/beta OS=Homo sapiens OX=9606 GN=GNPTAB PE=1 SV=1
Q5RGJ8	N-acetylglucosamine-1-phosphotransferase subunits alpha/beta OS=Danio rerio OX=7955 GN=gnptab PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007720 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06464 all species →	DMAP_binding	DMAP1-binding Domain	Domain	Interproscan
PF00066 all species →	Notch	LNR domain	Domain	Interproscan
PF17103 all species →	Stealth_CR4	Stealth protein CR4, conserved region 4	Family	Interproscan
PF11380 all species →	Stealth_CR2	Stealth protein CR2, conserved region 2	Family	Interproscan
PF17102 all species →	Stealth_CR3	Stealth protein CR3, conserved region 3	Family	Interproscan
PF17101 all species →	Stealth_CR1	Stealth protein CR1, conserved region 1	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010506 all species →	Domain	DMAP1-binding domain	Interproscan
IPR047141 all species →	Family	Stealth family	Interproscan
IPR000800 all species →	Domain	Notch domain	Interproscan
IPR031356 all species →	Domain	Stealth protein CR4, conserved region 4	Interproscan
IPR021520 all species →	Domain	Stealth protein CR2, conserved region 2	Interproscan
IPR031357 all species →	Domain	Stealth protein CR3, conserved region 3	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR031358 all species →	Domain	Stealth protein CR1, conserved region 1	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24045 all species →	-	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003976 all species →	Molecular Function	UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity	Interproscan
GO:0005794 all species →	Cellular Component	Golgi apparatus	Interproscan
GO:0016256 all species →	Biological Process	N-glycan processing to lysosome	Interproscan
GO:0046835 all species →	Biological Process	carbohydrate phosphorylation	Interproscan
GO:0016772 all species →	Molecular Function	transferase activity, transferring phosphorus-containing groups	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08239	GNPTAB; UDP-N-acetylglucosamine-lysosomal-enzyme	EC:2.7.8.17	Lysosome	ko04142	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.