Detailed information of evm.model.Chr09.1457 in Hemicorallium imperiale

Genomic Location: Chr09:23949497...23952032
NR annotation: XP_028398834.1, programmed cell death protein 2-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr09.1457 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P47816Programmed cell death protein 2 OS=Rattus norvegicus OX=10116 GN=Pdcd2 PE=2 SV=2
Q16342Programmed cell death protein 2 OS=Homo sapiens OX=9606 GN=PDCD2 PE=1 SV=2
Q2YDC9Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006728 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04194
all species →		PDCD2_CProgrammed cell death protein 2, C-terminal putative domain DomainInterproscan
PF01753
all species →		zf-MYNDMYND fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002893
all species →		DomainZinc finger, MYND-typeInterproscan
IPR007320
all species →		DomainProgrammed cell death protein 2, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12298
all species →		PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14801TSR4; pre-rRNA-processing protein TSR4-Ribosome biogenesisko03009deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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