Gene detail

Detailed information of evm.model.Chr09.1459 in Hemicorallium imperiale

Genomic Location: Chr09:23954312...23987877
NR annotation: CAB3981468.1, Fanconi anemia group M -like [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q8IYD8	Fanconi anemia group M protein OS=Homo sapiens OX=9606 GN=FANCM PE=1 SV=2
Q8BGE5	Fanconi anemia group M protein homolog OS=Mus musculus OX=10090 GN=Fancm PE=1 SV=3
A0A1D5PRR9	Fanconi anemia group M protein OS=Gallus gallus OX=9031 GN=FANCM PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04851	ResIII	Type III restriction enzyme, res subunit	Family	Interproscan
PF02732	ERCC4	ERCC4 domain	Domain	Interproscan
PF16783	FANCM-MHF_bd	FANCM to MHF binding domain	Domain	Interproscan
PF00271	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006935	Domain	Helicase/UvrB, N-terminal	Interproscan
IPR039686	Domain	FANCM/Mph1-like, insert domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR006166	Domain	ERCC4 domain	Interproscan
IPR001650	Domain	Helicase, C-terminal domain-like	Interproscan
IPR010994	Homologous_superfamily	RuvA domain 2-like	Interproscan
IPR031879	Domain	Fanconi anemia group M protein, MHF binding domain	Interproscan
IPR011335	Homologous_superfamily	Restriction endonuclease type II-like	Interproscan
IPR047418	Domain	Fanconi anemia group M protein, XPF-like nuclease domain	Interproscan
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR044749	Domain	FANCM, DEAH-box helicase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14025	FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016787	Molecular Function	hydrolase activity	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0043138	Molecular Function	3'-5' DNA helicase activity	Interproscan
GO:0004518	Molecular Function	nuclease activity	Interproscan
GO:0000400	Molecular Function	four-way junction DNA binding	Interproscan
GO:0009378	Molecular Function	four-way junction helicase activity	Interproscan
GO:0036297	Biological Process	interstrand cross-link repair	Interproscan
GO:0045003	Biological Process	double-strand break repair via synthesis-dependent strand annealing	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10896	FANCM; fanconi anemia group M protein	-	DNA repair and recombination proteins	ko03400	deepkoala