Genomic Location: Chr09:24129657...24144860
NR annotation: CAB3982899.1, RNA-binding Nova-1-like isoform X1 [Paramuricea clavata]
Species abbreviation HIMPE · all data for this species · gene families
evm.model.Chr09.1472 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q80WA4 | RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus OX=10116 GN=Nova1 PE=2 SV=1 |
| Q2PFW9 | RNA-binding protein Nova-1 OS=Macaca fascicularis OX=9541 GN=NOVA1 PE=2 SV=1 |
| A0A1W2P872 | RNA-binding protein Nova-2 OS=Mus musculus OX=10090 GN=Nova2 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005728 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00013 all species → | KH_1 | KH domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR004087 all species → | Domain | K Homology domain | Interproscan |
| IPR047276 all species → | Domain | RNA-binding protein Nova-1/2, type I K Homology domain 2 | Interproscan |
| IPR004088 all species → | Domain | K Homology domain, type 1 | Interproscan |
| IPR036612 all species → | Homologous_superfamily | K Homology domain, type 1 superfamily | Interproscan |
| IPR047275 all species → | Domain | RNA-binding protein Nova-1/2, type I K Homology domain 1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10288 all species → | KH DOMAIN CONTAINING RNA BINDING PROTEIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 all species → | Molecular Function | RNA binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K14944 | NOVA; RNA-binding protein Nova | - | Spliceosome | ko03041 | deepkoala |
