Detailed information of evm.model.Chr09.58 in Hemicorallium imperiale

Genomic Location: Chr09:2270902...2279256
NR annotation: XP_028396005.1, transcobalamin-2-like [Dendronephthya gigantea]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr09.58 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001572 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01122
all species →		Cobalamin_bindEukaryotic cobalamin-binding proteinRepeatInterproscan
PF14478
all species →		DUF4430Domain of unknown function (DUF4430)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002157
all species →		FamilyCobalamin (vitamin B12)-binding proteinInterproscan
IPR008930
all species →		Homologous_superfamilyTerpenoid cyclases/protein prenyltransferase alpha-alpha toroidInterproscan
IPR051588
all species →		FamilyEukaryotic Cobalamin TransportInterproscan
IPR027954
all species →		DomainTranscobalamin-like, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10559
all species →		TRANSCOBALAMIN-1/GASTRIC INTRINSIC FACTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0015889
all species →		Biological Processcobalamin transportInterproscan
GO:0031419
all species →		Molecular Functioncobalamin bindingInterproscan
GO:0005615
all species →		Cellular Componentextracellular spaceInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr09.58.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP