Gene detail

Detailed information of evm.model.Chr09.652 in Hemicorallium imperiale

Genomic Location: Chr09:13264317...13338250
NR annotation: CAB3989715.1, Hypothetical predicted protein [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Chr09.652 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P85120	Protein Daple OS=Xenopus laevis OX=8355 GN=ccdc88c PE=1 SV=1
Q9P219	Protein Daple OS=Homo sapiens OX=9606 GN=CCDC88C PE=1 SV=3
Q6VGS5	Protein Daple OS=Mus musculus OX=10090 GN=Ccdc88c PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002042 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19047 all species →	HOOK_N	HOOK domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036872 all species →	Homologous_superfamily	CH domain superfamily	Interproscan
IPR043936 all species →	Domain	HOOK, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18947 all species →	HOOK PROTEINS	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005813 all species →	Cellular Component	centrosome	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0030705 all species →	Biological Process	cytoskeleton-dependent intracellular transport	Interproscan
GO:0031122 all species →	Biological Process	cytoplasmic microtubule organization	Interproscan
GO:0051959 all species →	Molecular Function	dynein light intermediate chain binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16475	LRRCC1, CLERC; leucine-rich repeat and coiled-coil domain-containing protein 1	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.