Detailed information of evm.model.Chr09.676 in Hemicorallium imperiale

Genomic Location: Chr09:13941132...13953132
NR annotation: CAB4012420.1, THUMP domain-containing 3 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr09.676 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q2T9W2tRNA (guanine(6)-N(2))-methyltransferase THUMP3 OS=Bos taurus OX=9913 GN=THUMPD3 PE=2 SV=1
P97770tRNA (guanine(6)-N(2))-methyltransferase THUMP3 OS=Mus musculus OX=10090 GN=Thumpd3 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008111 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01170
all species →		UPF0020Putative RNA methylase family UPF0020DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000241
all species →		DomainRibosomal RNA large subunit methyltransferase K/L-like, methyltransferase domainInterproscan
IPR029063
all species →		Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14911
all species →		THUMP DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016423
all species →		Molecular FunctiontRNA (guanine) methyltransferase activityInterproscan
GO:0030488
all species →		Biological ProcesstRNA methylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr09.676.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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