Detailed information of evm.model.Chr09.712 in Hemicorallium imperiale

Genomic Location: Chr09:15196926...15249209
NR annotation: XP_028409762.1, nidogen-1-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A1Z877Nidogen OS=Drosophila melanogaster OX=7227 GN=Ndg PE=1 SV=1
Q07954Prolow-density lipoprotein receptor-related protein 1 OS=Homo sapiens OX=9606 GN=LRP1 PE=1 SV=2
Q91ZX7Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06119NIDONidogen-likeFamilyInterproscan
PF14670FXa_inhibitionCoagulation Factor Xa inhibitory siteDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF07474G2FG2F domainDomainInterproscan
PF12947EGF_3EGF domainDomainInterproscan
PF00058Ldl_recept_bLow-density lipoprotein receptor repeat class BRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR009017Homologous_superfamilyGreen fluorescent proteinInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR003886DomainNIDO domainInterproscan
IPR006605DomainG2 nidogen/fibulin G2FInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR000033RepeatLDLR class B repeatInterproscan
IPR024731DomainEGF domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24039FIBRILLIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

TOP