Detailed information of evm.model.Chr09.762 in Hemicorallium imperiale

Genomic Location: Chr09:16328282...16338833
NR annotation: CAB3991684.1, digestive organ expansion factor homolog [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr09.762 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q642T7U3 small nucleolar RNA-associated protein 25 homolog OS=Xenopus tropicalis OX=8364 GN=utp25 PE=2 SV=1
Q5ZLG3U3 small nucleolar RNA-associated protein 25 homolog OS=Gallus gallus OX=9031 GN=UTP25 PE=2 SV=1
Q6PEH4U3 small nucleolar RNA-associated protein 25 homolog OS=Danio rerio OX=7955 GN=utp25 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002910 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06862
all species →		UTP25Utp25, U3 small nucleolar RNA-associated SSU processome protein 25FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010678
all species →		FamilyU3 small nucleolar RNA-associated protein 25Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12933
all species →		ORF PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0006364
all species →		Biological ProcessrRNA processingInterproscan
GO:0034511
all species →		Molecular FunctionU3 snoRNA bindingInterproscan
GO:0000462
all species →		Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0019843
all species →		Molecular FunctionrRNA bindingInterproscan
GO:0032040
all species →		Cellular Componentsmall-subunit processomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K13211GCFC; GC-rich sequence DNA-binding factor-Spliceosomeko03041deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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