Gene detail

Detailed information of evm.model.Chr09.762 in Hemicorallium imperiale

Genomic Location: Chr09:16328282...16338833
NR annotation: CAB3991684.1, digestive organ expansion factor homolog [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q642T7	U3 small nucleolar RNA-associated protein 25 homolog OS=Xenopus tropicalis OX=8364 GN=utp25 PE=2 SV=1
Q5ZLG3	U3 small nucleolar RNA-associated protein 25 homolog OS=Gallus gallus OX=9031 GN=UTP25 PE=2 SV=1
Q6PEH4	U3 small nucleolar RNA-associated protein 25 homolog OS=Danio rerio OX=7955 GN=utp25 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06862	UTP25	Utp25, U3 small nucleolar RNA-associated SSU processome protein 25	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010678	Family	U3 small nucleolar RNA-associated protein 25	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12933	ORF PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005730	Cellular Component	nucleolus	Interproscan
GO:0006364	Biological Process	rRNA processing	Interproscan
GO:0034511	Molecular Function	U3 snoRNA binding	Interproscan
GO:0000462	Biological Process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	Interproscan
GO:0019843	Molecular Function	rRNA binding	Interproscan
GO:0032040	Cellular Component	small-subunit processome	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13211	GCFC; GC-rich sequence DNA-binding factor	-	Spliceosome	ko03041	deepkoala