Gene detail

Detailed information of evm.model.Chr09.85 in Hemicorallium imperiale

Genomic Location: Chr09:2779139...2790685
NR annotation: KXJ05838.1, Zinc finger SWIM domain-containing protein 3, partial [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|PHD
Ubiquitin Family	DUB\|ULP\|ULP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21599	ZSWIM3_N	Zinc finger SWIM domain-containing protein 3, N-terminal	Domain	Interproscan
PF21056	ZSWIM1-3_RNaseH-like	Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007527	Domain	Zinc finger, SWIM-type	Interproscan
IPR048325	Domain	ZSWIM3, N-terminal domain	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR019786	Conserved_site	Zinc finger, PHD-type, conserved site	Interproscan
IPR001965	Domain	Zinc finger, PHD-type	Interproscan
IPR019787	Domain	Zinc finger, PHD-finger	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR048324	Domain	ZSWIM1/3, RNaseH-like domain	Interproscan
IPR052579	Family	Zinc finger SWIM domain-containing protein	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31569	SWIM-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan