Detailed information of evm.model.Chr09.855 in Hemicorallium imperiale

Genomic Location: Chr09:17575169...17582183
NR annotation: CAB4001444.1, uncharacterized protein LOC110043988 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr09.855 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P0DJ98Putative membrane protein Bcell_0381 OS=Evansella cellulosilytica (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4) OX=649639 GN=Bcell_0381 PE=4 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006959 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12733
all species →
Cadherin-likeCadherin-like beta sandwich domainDomainInterproscan
PF13432
all species →
TPR_16Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR025883
all species →
DomainCadherin-like beta sandwich domainInterproscan
IPR051438
all species →
FamilyRNF E3 ubiquitin-protein ligaseInterproscan
IPR011990
all species →
Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46016
all species →
ZINC FINGER, RING/FYVE/PHD-TYPEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000209
all species →
Biological Processprotein polyubiquitinationInterproscan
GO:0006511
all species →
Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0061630
all species →
Molecular Functionubiquitin protein ligase activityInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr09.855.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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