Detailed information of evm.model.Chr09.865 in Hemicorallium imperiale

Genomic Location: Chr09:17687573...17709121
NR annotation: CAB3989873.1, puff-specific Bx42, partial [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr09.865 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5R7R9SNW domain-containing protein 1 OS=Pongo abelii OX=9601 GN=SNW1 PE=2 SV=1
Q13573SNW domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SNW1 PE=1 SV=1
Q1JQE0SNW domain-containing protein 1 OS=Bos taurus OX=9913 GN=SNW1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007118 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02731
all species →		SKIP_SNWSKIP/SNW domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004015
all species →		DomainSKI-interacting protein SKIP, SNW domainInterproscan
IPR017862
all species →		FamilySKI-interacting protein, SKIPInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12096
all species →		NUCLEAR PROTEIN SKIP-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000398
all species →		Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005681
all species →		Cellular Componentspliceosomal complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K06063SNW1, SKIIP, SKIP; SNW domain-containing protein 1-Spliceosomeko03041deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP