Genomic Location: Chr09:18118045...18120973
NR annotation: XP_046848646.1, aprataxin and PNK-like factor [Xenia sp. Carnegie-2017]
Species Hemicorallium imperiale · all data for this species · gene families
evm.model.Chr09.897 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0006240 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00498 all species → | FHA | FHA domain | Family | Interproscan |
| PF10283 all species → | zf-CCHH | PBZ domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000253 all species → | Domain | Forkhead-associated (FHA) domain | Interproscan |
| IPR008984 all species → | Homologous_superfamily | SMAD/FHA domain superfamily | Interproscan |
| IPR039253 all species → | Family | Aprataxin and PNK-like factor | Interproscan |
| IPR019406 all species → | Domain | Aprataxin and PNK-like factor, PBZ domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21315 all species → | UNCHARACTERIZED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0003906 all species → | Molecular Function | DNA-(apurinic or apyrimidinic site) endonuclease activity | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0006302 all species → | Biological Process | double-strand break repair | Interproscan |
| GO:0008408 all species → | Molecular Function | 3'-5' exonuclease activity | Interproscan |
| GO:0035861 all species → | Cellular Component | site of double-strand break | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K13295 | APLF; aprataxin and PNK-like factor | EC:3.1.-.- | DNA repair and recombination proteins | ko03400 | deepkoala |
