Detailed information of evm.model.Chr09.916 in Hemicorallium imperiale

Genomic Location: Chr09:18233504...18234665
NR annotation: CAB4009376.1, calmodulin isoform X2 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr09.916 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P25071Calmodulin-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=CML12 PE=1 SV=3
Q2QVI1Probable calcium-binding protein CML28 OS=Oryza sativa subsp. japonica OX=39947 GN=CML28 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000938 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13499
all species →		EF-hand_7EF-hand domain pairDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018247
all species →		Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR002048
all species →		DomainEF-hand domainInterproscan
IPR052591
all species →		FamilyCalcium-Dependent Signaling ProteinInterproscan
IPR011992
all species →		Homologous_superfamilyEF-hand domain pairInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23064
all species →		TROPONINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr09.916.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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