Detailed information of evm.model.Chr09.978 in Hemicorallium imperiale

Genomic Location: Chr09:18902173...18912278
NR annotation: XP_028398728.1, spermatogenesis-defective protein 39 homolog [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr09.978 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A7RP64RNA-binding protein pno1 OS=Nematostella vectensis OX=45351 GN=pno1 PE=3 SV=1
Q9NRX1RNA-binding protein PNO1 OS=Homo sapiens OX=9606 GN=PNO1 PE=1 SV=1
Q6DDB9RNA-binding protein PNO1 OS=Xenopus tropicalis OX=8364 GN=pno1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008041 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04840
all species →		Vps16_CVps16, C-terminal regionRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040057
all species →		FamilySpermatogenesis-defective protein 39Interproscan
IPR004087
all species →		DomainK Homology domainInterproscan
IPR036612
all species →		Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR038132
all species →		Homologous_superfamilyVps16, C-terminal domain superfamilyInterproscan
IPR006925
all species →		DomainVps16, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13364
all species →		DEFECTIVE SPERMATOGENESIS PROTEIN 39Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0006886
all species →		Biological Processintracellular protein transportInterproscan
GO:0007034
all species →		Biological Processvacuolar transportInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr09.978.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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