Detailed information of evm.model.Chr10.133 in Hemicorallium imperiale

Genomic Location: Chr10:3734183...3792425
NR annotation: XP_028401865.1, vacuolar protein sorting-associated protein 13C-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr10.133 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q709C8Intermembrane lipid transfer protein VPS13C OS=Homo sapiens OX=9606 GN=VPS13C PE=1 SV=1
Q8BX70Intermembrane lipid transfer protein VPS13C OS=Mus musculus OX=10090 GN=Vps13c PE=1 SV=2
A1Z713Intermembrane lipid transfer protein Vps13 OS=Drosophila melanogaster OX=7227 GN=Vps13 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000772 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16909
all species →		VPS13_DH-likeVacuolar-sorting-associated 13 protein, DH-like domainFamilyInterproscan
PF09333
all species →		ATG2-VPS13_CATG2/VPS13, C terminal domainDomainInterproscan
PF06650
all species →		VPS13_VABVacuolar-sorting associated protein 13, adaptor binding domainDomainInterproscan
PF21679
all species →		VPS13_CIntermembrane lipid transfer protein VPS13, C-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR031645
all species →		DomainVacuolar protein sorting-associated protein 13, DH-like domainInterproscan
IPR015412
all species →		DomainAtg2/VPS13, C-terminalInterproscan
IPR026847
all species →		FamilyVacuolar protein sorting-associated protein 13Interproscan
IPR009543
all species →		DomainVacuolar protein sorting-associated protein 13, VPS13 adaptor binding domainInterproscan
IPR049424
all species →		DomainIntermembrane lipid transfer protein VPS13, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16166
all species →		VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006623
all species →		Biological Processprotein targeting to vacuoleInterproscan
GO:0019898
all species →		Cellular Componentextrinsic component of membraneInterproscan
GO:0045053
all species →		Biological Processprotein retention in Golgi apparatusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr10.133.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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