Detailed information of evm.model.Chr10.202 in Hemicorallium imperiale

Genomic Location: Chr10:5467560...5478463
NR annotation: CAB4000235.1, pentatricopeptide repeat-containing At3g02650, mitochondrial [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9UMY4Sorting nexin-12 OS=Homo sapiens OX=9606 GN=SNX12 PE=1 SV=4
Q1RMH8Sorting nexin-3 OS=Bos taurus OX=9913 GN=SNX3 PE=2 SV=3
O60493Sorting nexin-3 OS=Homo sapiens OX=9606 GN=SNX3 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00787PXPX domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036871Homologous_superfamilyPX domain superfamilyInterproscan
IPR002885RepeatPentatricopeptide repeatInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR036855Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR001683DomainPhox homologyInterproscan
IPR051074FamilySorting NexinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45963RE52028PInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0035091Molecular Functionphosphatidylinositol bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0030904Cellular Componentretromer complexInterproscan
GO:0031901Cellular Componentearly endosome membraneInterproscan
GO:0032266Molecular Functionphosphatidylinositol-3-phosphate bindingInterproscan
GO:0032456Biological Processendocytic recyclingInterproscan
GO:0034499Biological Processlate endosome to Golgi transportInterproscan

TOP