Genomic Location: Chr10:7381646...7474738
NR annotation: XP_046848607.1, utrophin-like isoform X2 [Xenia sp. Carnegie-2017]
Species Hemicorallium imperiale · all data for this species · gene families
evm.model.Chr10.297 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| E1C231 | E3 ubiquitin-protein ligase listerin OS=Gallus gallus OX=9031 GN=LTN1 PE=3 SV=1 |
| Q6A009 | E3 ubiquitin-protein ligase listerin OS=Mus musculus OX=10090 GN=Ltn1 PE=1 SV=3 |
| O94822 | E3 ubiquitin-protein ligase listerin OS=Homo sapiens OX=9606 GN=LTN1 PE=1 SV=6 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003807 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00435 all species → | Spectrin | Spectrin repeat | Domain | Interproscan |
| PF00307 all species → | CH | Calponin homology (CH) domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR018159 all species → | Repeat | Spectrin/alpha-actinin | Interproscan |
| IPR036872 all species → | Homologous_superfamily | CH domain superfamily | Interproscan |
| IPR011989 all species → | Homologous_superfamily | Armadillo-like helical | Interproscan |
| IPR001715 all species → | Domain | Calponin homology domain | Interproscan |
| IPR039795 all species → | Family | E3 ubiquitin-protein ligase listerin | Interproscan |
| IPR002017 all species → | Repeat | Spectrin repeat | Interproscan |
| IPR016024 all species → | Homologous_superfamily | Armadillo-type fold | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12389 all species → | ZINC FINGER PROTEIN 294 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0005829 all species → | Cellular Component | cytosol | Interproscan |
| GO:0043023 all species → | Molecular Function | ribosomal large subunit binding | Interproscan |
| GO:0061630 all species → | Molecular Function | ubiquitin protein ligase activity | Interproscan |
| GO:0072344 all species → | Biological Process | rescue of stalled ribosome | Interproscan |
| GO:1990112 all species → | Cellular Component | RQC complex | Interproscan |
| GO:1990116 all species → | Biological Process | ribosome-associated ubiquitin-dependent protein catabolic process | Interproscan |
evm.model.Chr10.297.
