Detailed information of evm.model.Chr10.321 in Hemicorallium imperiale

Genomic Location: Chr10:7687595...7693560
NR annotation: CAB3977491.1, low density lipo receptor adapter 1 isoform X1 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr10.321 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8C142Low density lipoprotein receptor adapter protein 1 OS=Mus musculus OX=10090 GN=Ldlrap1 PE=1 SV=3
Q5SW96Low density lipoprotein receptor adapter protein 1 OS=Homo sapiens OX=9606 GN=LDLRAP1 PE=1 SV=3
D3ZAR1Low density lipoprotein receptor adapter protein 1 OS=Rattus norvegicus OX=10116 GN=Ldlrap1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001798 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14719
all species →		PID_2Phosphotyrosine interaction domain (PTB/PID)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006020
all species →		DomainPTB/PI domainInterproscan
IPR011993
all species →		Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR051133
all species →		FamilyAdapter and Engulfment Domain-Containing ProteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11232
all species →		PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBERInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Chr10.321. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K12474LDLRAP1, ARH; low density lipoprotein receptor adapter protein 1-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP