Detailed information of evm.model.Chr10.358 in Hemicorallium imperiale

Genomic Location: Chr10:8063381...8069148
NR annotation: XP_028411233.1, PAX3- and PAX7-binding protein 1-like [Dendronephthya gigantea]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr10.358 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P58501PAX3- and PAX7-binding protein 1 OS=Mus musculus OX=10090 GN=Paxbp1 PE=1 SV=3
Q9Y5B6PAX3- and PAX7-binding protein 1 OS=Homo sapiens OX=9606 GN=PAXBP1 PE=1 SV=2
P16383Intron Large complex component GCFC2 OS=Homo sapiens OX=9606 GN=GCFC2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005401 (this species only)
Transcription factor familyGCFC · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07842
all species →
GCFCGC-rich sequence DNA-binding factor-like proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012890
all species →
FamilyIntron Large complex component GCFC2-likeInterproscan
IPR022783
all species →
DomainGCF, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12214
all species →
GC-RICH SEQUENCE DNA-BINDING FACTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000398
all species →
Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr10.358.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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