Detailed information of evm.model.Chr10.494 in Hemicorallium imperiale

Genomic Location: Chr10:9617629...9632706
NR annotation: CAB3978103.1, neurogenic locus notch homolog 2-like [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr10.494 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7SZB5Charged multivesicular body protein 1b OS=Xenopus laevis OX=8355 GN=chmp1b PE=2 SV=1
Q6DF27Charged multivesicular body protein 1b OS=Xenopus tropicalis OX=8364 GN=chmp1b PE=2 SV=1
Q5ZKX1Charged multivesicular body protein 1b OS=Gallus gallus OX=9031 GN=CHMP1B PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002790 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03357
all species →		Snf7Snf7FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR036056
all species →		Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR005024
all species →		FamilySnf7 familyInterproscan
IPR014716
all species →		Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10476
all species →		CHARGED MULTIVESICULAR BODY PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000815
all species →		Cellular ComponentESCRT III complexInterproscan
GO:0005771
all species →		Cellular Componentmultivesicular bodyInterproscan
GO:0007034
all species →		Biological Processvacuolar transportInterproscan
GO:0015031
all species →		Biological Processprotein transportInterproscan
GO:0032509
all species →		Biological Processendosome transport via multivesicular body sorting pathwayInterproscan
GO:0045324
all species →		Biological Processlate endosome to vacuole transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr10.494.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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