Gene detail

Detailed information of evm.model.Chr10.502 in Hemicorallium imperiale

Genomic Location: Chr10:9800938...9844358
NR annotation: XP_028415263.1, glutamate synthase [NADH], amyloplastic-like [Dendronephthya gigantea]
Species abbreviation HIMPE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Chr10.502 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9C102	Glutamate synthase [NADH] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=glt1 PE=1 SV=1
Q03460	Glutamate synthase [NADH], amyloplastic OS=Medicago sativa OX=3879 PE=1 SV=1
Q0DG35	Glutamate synthase 2 [NADH], chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0555600 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002031 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01645 all species →	Glu_synthase	Conserved region in glutamate synthase	Domain	Interproscan
PF07992 all species →	Pyr_redox_2	Pyridine nucleotide-disulphide oxidoreductase	Domain	Interproscan
PF04898 all species →	Glu_syn_central	Glutamate synthase central domain	Domain	Interproscan
PF00310 all species →	GATase_2	Glutamine amidotransferases class-II	Domain	Interproscan
PF04968 all species →	CHORD	CHORD	Family	Interproscan
PF01493 all species →	GXGXG	GXGXG motif	Family	Interproscan
PF04969 all species →	CS	CS domain	Domain	Interproscan
PF14691 all species →	Fer4_20	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029055 all species →	Homologous_superfamily	Nucleophile aminohydrolases, N-terminal	Interproscan
IPR017932 all species →	Domain	Glutamine amidotransferase type 2 domain	Interproscan
IPR036188 all species →	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR002489 all species →	Domain	Glutamate synthase, alpha subunit, C-terminal	Interproscan
IPR012220 all species →	Family	Glutamate synthase, eukaryotic	Interproscan
IPR009051 all species →	Homologous_superfamily	Alpha-helical ferredoxin	Interproscan
IPR002932 all species →	Domain	Glutamate synthase domain	Interproscan
IPR036485 all species →	Homologous_superfamily	Glutamate synthase, alpha subunit, C-terminal domain superfamily	Interproscan
IPR023753 all species →	Domain	FAD/NAD(P)-binding domain	Interproscan
IPR006982 all species →	Domain	Glutamate synthase, central-N	Interproscan
IPR017896 all species →	Domain	4Fe-4S ferredoxin-type, iron-sulphur binding domain	Interproscan
IPR007051 all species →	Domain	CHORD domain	Interproscan
IPR006005 all species →	Family	Glutamate synthase, NADH/NADPH, small subunit 1	Interproscan
IPR007052 all species →	Domain	CS domain	Interproscan
IPR008978 all species →	Homologous_superfamily	HSP20-like chaperone	Interproscan
IPR013785 all species →	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR051394 all species →	Family	Glutamate Synthase	Interproscan
IPR028261 all species →	Domain	Dihydroprymidine dehydrogenase domain II	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43100 all species →	GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0005506 all species →	Molecular Function	iron ion binding	Interproscan
GO:0006537 all species →	Biological Process	glutamate biosynthetic process	Interproscan
GO:0010181 all species →	Molecular Function	FMN binding	Interproscan
GO:0016040 all species →	Molecular Function	glutamate synthase (NADH) activity	Interproscan
GO:0050660 all species →	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0051536 all species →	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0015930 all species →	Molecular Function	glutamate synthase activity	Interproscan
GO:0016638 all species →	Molecular Function	oxidoreductase activity, acting on the CH-NH2 group of donors	Interproscan
GO:0006807 all species →	Biological Process	obsolete nitrogen compound metabolic process	Interproscan
GO:0016639 all species →	Molecular Function	oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00264	GLT1; glutamate synthase (NADH)	EC:1.4.1.14	Alanine, aspartate and glutamate metabolism	ko00250	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.