Detailed information of evm.model.Chr10.521 in Hemicorallium imperiale

Genomic Location: Chr10:10131991...10155565
NR annotation: CAH3195255.1, unnamed protein product, partial [Porites evermanni]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr10.521 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P40429Large ribosomal subunit protein uL13 OS=Homo sapiens OX=9606 GN=RPL13A PE=1 SV=2
Q4R8Z2Large ribosomal subunit protein uL13 OS=Macaca fascicularis OX=9541 GN=RPL13A PE=2 SV=3
G1TVS8Large ribosomal subunit protein uL13 OS=Oryctolagus cuniculus OX=9986 GN=RPL13A PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006724 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00572
all species →		Ribosomal_L13Ribosomal protein L13FamilyInterproscan
PF01592
all species →		NifU_NNifU-like N terminal domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036899
all species →		Homologous_superfamilyLarge ribosomal subunit protein uL13 superfamilyInterproscan
IPR005822
all species →		FamilyLarge ribosomal subunit protein uL13Interproscan
IPR011339
all species →		FamilyIron-sulfur cluster assembly scaffold protein IscUInterproscan
IPR002871
all species →		DomainNIF system FeS cluster assembly, NifU, N-terminalInterproscan
IPR023563
all species →		Conserved_siteLarge ribosomal subunit protein uL13, conserved siteInterproscan
IPR005755
all species →		FamilyLarge ribosomal subunit protein uL13, eukaryotic/archaealInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11545
all species →		RIBOSOMAL PROTEIN L13Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840
all species →		Cellular ComponentribosomeInterproscan
GO:0006412
all species →		Biological ProcesstranslationInterproscan
GO:0005506
all species →		Molecular Functioniron ion bindingInterproscan
GO:0016226
all species →		Biological Processiron-sulfur cluster assemblyInterproscan
GO:0051536
all species →		Molecular Functioniron-sulfur cluster bindingInterproscan
GO:0003729
all species →		Molecular FunctionmRNA bindingInterproscan
GO:0017148
all species →		Biological Processnegative regulation of translationInterproscan
GO:0022625
all species →		Cellular Componentcytosolic large ribosomal subunitInterproscan
GO:0015934
all species →		Cellular Componentlarge ribosomal subunitInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr10.521.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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