Detailed information of evm.model.Chr10.569 in Hemicorallium imperiale

Genomic Location: Chr10:11198591...11203278
NR annotation: XP_028413410.1, superoxide dismutase [Cu-Zn]-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr10.569 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P81926Superoxide dismutase [Cu-Zn] OS=Halocynthia roretzi OX=7729 PE=1 SV=2
P00443Superoxide dismutase [Cu-Zn] OS=Equus caballus OX=9796 GN=SOD1 PE=1 SV=2
P28755Superoxide dismutase [Cu-Zn] OS=Ceratitis capitata OX=7213 GN=Sod1 PE=3 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000995 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00080
all species →		Sod_CuCopper/zinc superoxide dismutase (SODC)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018152
all species →		Binding_siteSuperoxide dismutase, copper/zinc, binding siteInterproscan
IPR036423
all species →		Homologous_superfamilySuperoxide dismutase-like, copper/zinc binding domain superfamilyInterproscan
IPR001424
all species →		DomainSuperoxide dismutase, copper/zinc binding domainInterproscan
IPR024134
all species →		FamilySuperoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperoneInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10003
all species →		SUPEROXIDE DISMUTASE CU-ZN -RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006801
all species →		Biological Processsuperoxide metabolic processInterproscan
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan
GO:0005507
all species →		Molecular Functioncopper ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K04565SOD1; superoxide dismutase, Cu-Zn familyEC:1.15.1.1
Pathways of neurodegeneration - multiple diseasesko05022deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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