Detailed information of evm.model.Chr10.600 in Hemicorallium imperiale

Genomic Location: Chr10:12173789...12252530
NR annotation: XP_028414575.1, mediator of RNA polymerase II transcription subunit 23-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6P423Mediator of RNA polymerase II transcription subunit 23 OS=Xenopus laevis OX=8355 GN=med23 PE=2 SV=1
Q5EB59Mediator of RNA polymerase II transcription subunit 23 OS=Rattus norvegicus OX=10116 GN=Med23 PE=2 SV=2
Q80YQ2Mediator of RNA polymerase II transcription subunit 23 OS=Mus musculus OX=10090 GN=Med23 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21524SAMD1_WHSAM domain-containing protein 1, WH domainDomainInterproscan
PF00439BromodomainBromodomainDomainInterproscan
PF00855PWWPPWWP domainDomainInterproscan
PF11573Med23Mediator complex subunit 23FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR036427Homologous_superfamilyBromodomain-like superfamilyInterproscan
IPR048589DomainSAM domain-containing protein 1-like, WH domainInterproscan
IPR021629FamilyMediator complex, subunit Med23Interproscan
IPR001487DomainBromodomainInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR000313DomainPWWP domainInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR002893DomainZinc finger, MYND-typeInterproscan
IPR047268DomainZinc finger MYND domain-containing protein 11, PWWP domainInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12691MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0010628Biological Processpositive regulation of gene expressionInterproscan
GO:0016592Cellular Componentmediator complexInterproscan

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