Detailed information of evm.model.Chr10.636 in Hemicorallium imperiale

Genomic Location: Chr10:13756618...13803576
NR annotation: CAB3978859.1, microtubule-associated futsch-like isoform X1 [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A0MTA1DNA repair nuclease APEX1 OS=Danio rerio OX=7955 GN=apex1 PE=1 SV=1
P37454Exodeoxyribonuclease OS=Bacillus subtilis (strain 168) OX=224308 GN=exoA PE=1 SV=1
P28352DNA repair nuclease/redox regulator APEX1 OS=Mus musculus OX=10090 GN=Apex1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF00169PHPH domainDomainInterproscan
PF00595PDZPDZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001478DomainPDZ domainInterproscan
IPR001849DomainPleckstrin homology domainInterproscan
IPR004808FamilyAP endonuclease 1Interproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR020847Binding_siteAP endonuclease 1, binding siteInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR020848Conserved_siteAP endonuclease 1, conserved siteInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22748AP ENDONUCLEASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004518Molecular Functionnuclease activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0004519Molecular Functionendonuclease activityInterproscan
GO:0003906Molecular FunctionDNA-(apurinic or apyrimidinic site) endonuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006284Biological Processbase-excision repairInterproscan
GO:0008081Molecular Functionphosphoric diester hydrolase activityInterproscan
GO:0008311Molecular Functiondouble-stranded DNA 3'-5' DNA exonuclease activityInterproscan

TOP