Detailed information of evm.model.Chr10.644 in Hemicorallium imperiale

Genomic Location: Chr10:14194161...14233847
NR annotation: XP_028415489.1, nucleolar pre-ribosomal-associated protein 1-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr10.644 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O60287Nucleolar pre-ribosomal-associated protein 1 OS=Homo sapiens OX=9606 GN=URB1 PE=1 SV=4
Q571H0Nucleolar pre-ribosomal-associated protein 1 OS=Mus musculus OX=10090 GN=Urb1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002517 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16201
all species →
NopRA1Nucleolar pre-ribosomal-associated protein 1FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016024
all species →
Homologous_superfamilyArmadillo-type foldInterproscan
IPR039844
all species →
FamilyNucleolar pre-ribosomal-associated protein 1Interproscan
IPR032436
all species →
DomainNucleolar pre-ribosomal-associated protein 1, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13500
all species →
NUCLEOLAR PRERIBOSOMAL-ASSOCIATED PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000463
all species →
Biological Processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000466
all species →
Biological Processmaturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005730
all species →
Cellular ComponentnucleolusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr10.644.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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