Gene detail

Detailed information of evm.model.Chr10.705 in Hemicorallium imperiale

Genomic Location: Chr10:15663178...15682917
NR annotation: XP_028414525.1, cytoplasmic tRNA 2-thiolation protein 1-like [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q803X1	Cytoplasmic tRNA 2-thiolation protein 1 OS=Danio rerio OX=7955 GN=ctu1 PE=2 SV=1
B4HSL7	Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosophila sechellia OX=7238 GN=GM20632 PE=3 SV=1
B4LM02	Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosophila virilis OX=7244 GN=GJ21203 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01171	ATP_bind_3	PP-loop family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011063	Domain	tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal	Interproscan
IPR020554	Conserved_site	Uncharacterised protein family UPF0021, conserved site	Interproscan
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11807	ATPASES OF THE PP SUPERFAMILY-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000049	Molecular Function	tRNA binding	Interproscan
GO:0002143	Biological Process	tRNA wobble position uridine thiolation	Interproscan
GO:0002144	Cellular Component	cytosolic tRNA wobble base thiouridylase complex	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14168	CTU1, NCS6; cytoplasmic tRNA 2-thiolation protein 1	EC:2.7.7.-	Transfer RNA biogenesis	ko03016	deepkoala