Detailed information of evm.model.Chr10.871 in Hemicorallium imperiale

Genomic Location: Chr10:20662347...20719826
NR annotation: CAB4033130.1, structural maintenance of chromosomes 6-like, partial [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr10.871 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6P9I7Structural maintenance of chromosomes protein 6 OS=Xenopus laevis OX=8355 GN=smc6 PE=2 SV=1
Q96SB8Structural maintenance of chromosomes protein 6 OS=Homo sapiens OX=9606 GN=SMC6 PE=1 SV=2
Q924W5Structural maintenance of chromosomes protein 6 OS=Mus musculus OX=10090 GN=Smc6 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001806 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13476
all species →		AAA_23AAA domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038729
all species →		DomainRad50/SbcC-type AAA domainInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19306
all species →		STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006302
all species →		Biological Processdouble-strand break repairInterproscan
GO:0016887
all species →		Molecular FunctionATP hydrolysis activityInterproscan
GO:0000724
all species →		Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0003684
all species →		Molecular Functiondamaged DNA bindingInterproscan
GO:0003697
all species →		Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0030915
all species →		Cellular ComponentSmc5-Smc6 complexInterproscan
GO:0035861
all species →		Cellular Componentsite of double-strand breakInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr10.871.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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