Detailed information of evm.model.Chr11.271 in Hemicorallium imperiale

Genomic Location: Chr11:5624466...5632385
NR annotation: CAB3995963.1, glycerophosphodiester phosphodiesterase 1-like [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr11.271 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9JL56Glycerophosphodiester phosphodiesterase 1 OS=Mus musculus OX=10090 GN=Gde1 PE=1 SV=1
Q3T0T0Glycerophosphodiester phosphodiesterase 1 OS=Bos taurus OX=9913 GN=GDE1 PE=2 SV=1
Q9JL55Glycerophosphodiester phosphodiesterase 1 OS=Rattus norvegicus OX=10116 GN=Gde1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002359 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03009
all species →		GDPDGlycerophosphoryl diester phosphodiesterase familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017946
all species →		Homologous_superfamilyPLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamilyInterproscan
IPR030395
all species →		DomainGlycerophosphodiester phosphodiesterase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46320
all species →		GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006629
all species →		Biological Processlipid metabolic processInterproscan
GO:0008081
all species →		Molecular Functionphosphoric diester hydrolase activityInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0006580
all species →		Biological Processethanolamine metabolic processInterproscan
GO:0006644
all species →		Biological Processphospholipid metabolic processInterproscan
GO:0008889
all species →		Molecular Functionglycerophosphodiester phosphodiesterase activityInterproscan
GO:0070291
all species →		Biological ProcessN-acylethanolamine metabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr11.271.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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