Gene detail

Detailed information of evm.model.Chr11.472 in Hemicorallium imperiale

Genomic Location: Chr11:9188900...9190779
NR annotation: CAB3989767.1, transcription factor Sox-9-like [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q6DFF5	Transcription factor Sox-9-B OS=Xenopus laevis OX=8355 GN=sox9-b PE=2 SV=1
B7ZR65	Transcription factor Sox-9-A OS=Xenopus laevis OX=8355 GN=sox9-a PE=1 SV=1
Q6F2E7	Transcription factor Sox-9 OS=Xenopus tropicalis OX=8364 GN=sox9 PE=1 SV=1

Gene family	Subfamily
Transcription Factors Family	HMG

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00505	HMG_box	HMG (high mobility group) box	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009071	Domain	High mobility group box domain	Interproscan
IPR036910	Homologous_superfamily	High mobility group box domain superfamily	Interproscan
IPR050917	Family	SOX Transcription Factors	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45803	SOX100B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18435	SOX9; transcription factor SOX9 (SOX group E)	-	Transcription factors	ko03000	deepkoala