Detailed information of evm.model.Chr11.474 in Hemicorallium imperiale

Genomic Location: Chr11:9254598...9256260
NR annotation: CAB3983573.1, transcription factor SOX-9 [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
A4IIJ8Transcription factor Sox-10 OS=Xenopus tropicalis OX=8364 GN=sox10 PE=2 SV=1
P57073Transcription factor SOX-8 OS=Homo sapiens OX=9606 GN=SOX8 PE=1 SV=1
Q04886Transcription factor SOX-8 OS=Mus musculus OX=10090 GN=Sox8 PE=2 SV=2
Gene familySubfamily
Transcription Factors FamilyHMG

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR009071DomainHigh mobility group box domainInterproscan
IPR050917FamilySOX Transcription FactorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45803SOX100BInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

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