Detailed information of evm.model.Chr11.480 in Hemicorallium imperiale

Genomic Location: Chr11:9331540...9342123
NR annotation: XP_028395275.1, chromosome transmission fidelity protein 18 homolog isoform X2 [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr11.480 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6NU40Chromosome transmission fidelity protein 18 homolog OS=Xenopus laevis OX=8355 GN=chtf18 PE=2 SV=1
Q8WVB6Chromosome transmission fidelity protein 18 homolog OS=Homo sapiens OX=9606 GN=CHTF18 PE=1 SV=1
Q8BIW9Chromosome transmission fidelity protein 18 homolog OS=Mus musculus OX=10090 GN=Chtf18 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003252 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00004
all species →		AAAATPase family associated with various cellular activities (AAA)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR053016
all species →		FamilyCTF18-RFC complex componentInterproscan
IPR003959
all species →		DomainATPase, AAA-type, coreInterproscan
IPR003593
all species →		DomainAAA+ ATPase domainInterproscan
IPR047854
all species →		DomainReplication factor C, lid domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46765
all species →		P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0016887
all species →		Molecular FunctionATP hydrolysis activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11269CTF18, CHL12; chromosome transmission fidelity protein 18-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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