Detailed information of evm.model.Chr11.702 in Hemicorallium imperiale

Genomic Location: Chr11:11721311...11782768
NR annotation: XP_028406518.1, polycystin-1-like isoform X1 [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6NRT5COP9 signalosome complex subunit 1 OS=Xenopus laevis OX=8355 GN=csn1 PE=2 SV=1
Q13098COP9 signalosome complex subunit 1 OS=Homo sapiens OX=9606 GN=GPS1 PE=1 SV=4
Q99LD4COP9 signalosome complex subunit 1 OS=Mus musculus OX=10090 GN=Gps1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21151CSN1_CCOP9 signalosome complex subunit 1, C-terminal helixDomainInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF10602RPN726S proteasome subunit RPN7RepeatInterproscan
PF01399PCIPCI domainDomainInterproscan
PF08016PKD_channelPolycystin cation channelFamilyInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF00801PKDPKD domainDomainInterproscan
PF01825GPSGPCR proteolysis site, GPS, motif MotifInterproscan
PF01822WSCWSC domainDomainInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan
PF02010REJREJ domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048624DomainCOP9 signalosome complex subunit 1, C-terminal helixInterproscan
IPR003915FamilyPolycystic kidney disease type 2 proteinInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR046338Homologous_superfamilyGAIN domain superfamilyInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR000601DomainPKD domainInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR051223FamilyPolycystinInterproscan
IPR045135Domain26S proteasome regulatory subunit Rpn7, N-terminalInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR027359Homologous_superfamilyVoltage-dependent channel domain superfamilyInterproscan
IPR022409DomainPKD/Chitinase domainInterproscan
IPR000717DomainProteasome component (PCI) domainInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR027267Homologous_superfamilyAH/BAR domain superfamilyInterproscan
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan
IPR000203Conserved_siteGPS motifInterproscan
IPR035986Homologous_superfamilyPKD domain superfamilyInterproscan
IPR014010DomainREJ domainInterproscan
IPR002889DomainCarbohydrate-binding WSCInterproscan
IPR046791DomainPolycystin domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR011049Homologous_superfamilySerralysin-like metalloprotease, C-terminalInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR002859DomainPKD/REJ-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10877POLYCYSTIN FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0050982Biological Processdetection of mechanical stimulusInterproscan

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