Detailed information of evm.model.Chr11.708 in Hemicorallium imperiale

Genomic Location: Chr11:11871149...11878593
NR annotation: CAB3984336.1, Hypothetical predicted protein [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr11.708 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7T076U7 snRNA-associated Sm-like protein LSm11 OS=Xenopus laevis OX=8355 GN=lsm11 PE=2 SV=1
P83369U7 snRNA-associated Sm-like protein LSm11 OS=Homo sapiens OX=9606 GN=LSM11 PE=1 SV=2
Q8BUV6U7 snRNA-associated Sm-like protein LSm11 OS=Mus musculus OX=10090 GN=Lsm11 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007761 (this species only)

 Pfam domain
No Pfam domain signature was detected for evm.model.Chr11.708. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR039267
all species →		FamilyU7 snRNA-associated Sm-like protein Lsm11Interproscan
IPR010920
all species →		Homologous_superfamilyLSM domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21415
all species →		U7 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM11Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005683
all species →		Cellular ComponentU7 snRNPInterproscan
GO:0006398
all species →		Biological ProcessmRNA 3'-end processing by stem-loop binding and cleavageInterproscan
GO:0071209
all species →		Molecular FunctionU7 snRNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr11.708.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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