Detailed information of evm.model.Chr11.748 in Hemicorallium imperiale

Genomic Location: Chr11:12521594...12525116
NR annotation: CAB3979248.1, synaptogyrin-2 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr11.748 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A7E3W5Synaptogyrin-2 OS=Bos taurus OX=9913 GN=SYNGR2 PE=2 SV=1
O43759Synaptogyrin-1 OS=Homo sapiens OX=9606 GN=SYNGR1 PE=1 SV=2
Q5R703Synaptogyrin-1 OS=Pongo abelii OX=9601 GN=SYNGR1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007282 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01284
all species →		MARVELMembrane-associating domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008253
all species →		DomainMarvel domainInterproscan
IPR016579
all species →		FamilySynaptogyrinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10838
all species →		SYNAPTOGYRINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0030672
all species →		Cellular Componentsynaptic vesicle membraneInterproscan
GO:0031594
all species →		Cellular Componentneuromuscular junctionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr11.748.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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