Detailed information of evm.model.Chr11.798 in Hemicorallium imperiale

Genomic Location: Chr11:13871534...13999207
NR annotation: CAB3994428.1, caskin-2-like isoform X5 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr11.798 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8VHK1Caskin-2 OS=Mus musculus OX=10090 GN=Caskin2 PE=1 SV=3
Q8WXE0Caskin-2 OS=Homo sapiens OX=9606 GN=CASKIN2 PE=1 SV=2
P49802Regulator of G-protein signaling 7 OS=Homo sapiens OX=9606 GN=RGS7 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009293 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12796
all species →		Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF07647
all species →		SAM_2SAM domain (Sterile alpha motif)DomainInterproscan
PF00536
all species →		SAM_1SAM domain (Sterile alpha motif)DomainInterproscan
PF14047
all species →		DCRDppa2/4 conserved regionFamilyInterproscan
PF00023
all species →		AnkAnkyrin repeatRepeatInterproscan
PF07653
all species →		SH3_2Variant SH3 domainDomainInterproscan
PF00615
all species →		RGSRegulator of G protein signaling domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036770
all species →		Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR002110
all species →		RepeatAnkyrin repeatInterproscan
IPR001660
all species →		DomainSterile alpha motif domainInterproscan
IPR044926
all species →		Homologous_superfamilyRGS, subdomain 2Interproscan
IPR013761
all species →		Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR001452
all species →		DomainSH3 domainInterproscan
IPR036028
all species →		Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR025891
all species →		DomainDevelopmental pluripotency-associated protein 2/4, C-terminal domainInterproscan
IPR036361
all species →		Homologous_superfamilySAP domain superfamilyInterproscan
IPR016137
all species →		DomainRGS domainInterproscan
IPR036305
all species →		Homologous_superfamilyRGS domain superfamilyInterproscan
IPR033635
all species →		FamilyAnkyrin repeat and SAM domain-containing protein 1/CaskinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24174
all species →		ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr11.798.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP